Insertion junction: CLIP2.065176_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065176
Chromosome:chromosome 7
Location:3486416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335950 (1 of 2) K10523 - speckle-type POZ protein (SPOP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGAGATGAAGCATCGCCCCAGTGCATGCAGGATGATCGGCGCTCATCA
Internal bar code:TCAATTATTCACAAAGAACGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2914
LEAP-Seq percent confirming:70.9302
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCACGCCTGCACAATAT
Suggested primer 2:TACTCGTGCGTCCTTCCCTA