Insertion junction: CLIP2.065177_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065177
Chromosome:chromosome 16
Location:5539009
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCCAGGGCATCCCCGGGACACCAAGTAAAAATTCGAAGGCCCTGCAT
Internal bar code:ACGGACAACTTATTAGGTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2025
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCCGTGGTCAATTGCTA
Suggested primer 2:ACTCGATGGTGCAAAGAGGG