Insertion junction: CLIP2.065189_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065189
Chromosome:chromosome 17
Location:3191291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCGTACCCCCAATTGCTCCGAAGCAGTCGCTGCCCTGCTGTGCGCAC
Internal bar code:CGCAAGGACGGCCCACGTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:4683
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTATCCAAGTCCGCTGC
Suggested primer 2:TACGGGCGCAGTGGAATATC