Insertion junction: CLIP2.065196_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065196
Chromosome:chromosome 13
Location:3998414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590350 BLZ11 bZIP transcription factor; (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTTGCTACTCTTACTGCGTTTATTATTCGTTAGTAAAGACCAGCAAT
Internal bar code:CGTATGGCTAAAGTGACTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2221
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAGGAACAAGGTGTGGC
Suggested primer 2:GCCTTCGGGAACTCTCCTTC