Insertion junction: CLIP2.065210_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065210
Chromosome:chromosome 16
Location:2007437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656750 (1 of 2) PTHR12210//PTHR12210:SF70 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // AT02326P-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTAGGCACCGTACGAGGGCGCGAGTGAGCAGGGCGGCGGCGGCAGGTAA
Internal bar code:AGATATCTCTCACCAACCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5558
LEAP-Seq percent confirming:98.1481
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGGGTTCCTCTGGTCC
Suggested primer 2:TCGTAAGTCGCAACAAGCCT