Insertion junction: CLIP2.065215_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065215
Chromosome:chromosome 9
Location:5810440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411350 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACCCGCGTGTACACGTGCGGCAGGATTGGGCATGCCCAACCTGAAA
Internal bar code:ATAGGCCTGGGTGCGGGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1813
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACCAGCACAGGACAACA
Suggested primer 2:GGCGTTTGAGGCCTTAGTCT