Insertion junction: CLIP2.065217_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065217
Chromosome:chromosome 9
Location:289649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g386750 HSP90A Heat shock protein 90A; (1 of 1) K04079 - molecular chaperone HtpG (htpG, HSP90A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGGCACGCCCACGACGAGTCGGTGTCGTGTGGGCGGTCACAGTGGGG
Internal bar code:CCAATCCGGATCCATAAAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2097
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACCGACTTGTCAGTGAG
Suggested primer 2:TGTGGGGGTGTTCACAAACA