Insertion junction: CLIP2.065222_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065222
Chromosome:chromosome 9
Location:3543458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396512 OPR12 OctotricoPeptide Repeat protein 12 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGATACAAGGAAATATAGGCTTGATCGGTGATTTACTAGAATTGACG
Internal bar code:GCCGCTTTGGCCTTGTCCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACTGTCCCGTCTTTGAA
Suggested primer 2:TGGGGGACGATTGTTGAGTG