Insertion junction: CLIP2.065238_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065238
Chromosome:chromosome 6
Location:6400197
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g293400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCAACCGGTGGGGAGCAGCGTATGTGTTGTGAGGGGTACAACGCGCC
Internal bar code:TGTGGATGTTACCGGCTATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:332
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTTATACGCACTGCTGCCCA
Suggested primer 2:GACCAGGGTGAGTGAGTGTG