Insertion junction: CLIP2.065243_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065243
Chromosome:chromosome 10
Location:3053016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441000 (1 of 1) K17498 - transcription factor SPN1 (SPN1, IWS1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACCGACCTGTGTCCCTACCGTAAAACTGGAAACCAGAAGCCCAGCAC
Internal bar code:GGGGATCGAGTCTCTACCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5566
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTGCTCGACTATCCACC
Suggested primer 2:TCCGAGGTGTTGTTTCCGAG