Insertion junction: CLIP2.065247_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065247
Chromosome:chromosome 1
Location:6863555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049200 (1 of 4) PTHR10334//PTHR10334:SF224 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGCGCAGGGCTAGGAGCTGGGCTGGGAGGCGCAGGCGGGACAGGCG
Internal bar code:GGGCCACAGGTGAGCGGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1980
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCACCCTTTCCGCCTAG
Suggested primer 2:CGCGTTCATACCTGTGCTTG