Insertion junction: CLIP2.065267_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065267
Chromosome:chromosome 8
Location:3792629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCACCCAATGCGCGTGGCAATATCGCACTGAGTGCTTGCTTGCGCTAG
Internal bar code:ATCGAGCGAGACGGGCAATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2112
LEAP-Seq percent confirming:24.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCTCGCCATTTGAAGAT
Suggested primer 2:GAAATCCACACGCCACACAC