Insertion junction: CLIP2.065273_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065273
Chromosome:chromosome 13
Location:4174477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591350 MFT27 Major facilitator superfamily transporter; (1 of 22) IPR011701//IPR020846 - Major facilitator superfamily // Major facilitator superfamily domain 5'UTR
Cre13.g591400 COA1,COAA1 (1 of 1) 2.7.1.33 - Pantothenate kinase / Pantothenic acid kinase; Pantothenate kinase, CoA biosynthesis 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAGCTATGCCATTGGTCCTTGTTCCAAAGTTTGTTGGTTATCCAGTT
Internal bar code:TTGCAGACACGATTTACACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1792
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGATGTTTAGCCACCGT
Suggested primer 2:GCATGGAAGACGGGGATAGG