Insertion junction: CLIP2.065275_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065275
Chromosome:chromosome 16
Location:4169255
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670400 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGGATGTCTGCTCACGAAATGGGGCAGGAGACGCGGTGCCGAAAGGC
Internal bar code:TACGCTTCCGGTAGTGCGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1964
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTGCAACACCCTACGA
Suggested primer 2:GGGGAGTGAATGCAAGGACA