Insertion junction: CLIP2.065282_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065282
Chromosome:chromosome 1
Location:88213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g000600 (1 of 1) PTHR19848//PTHR19848:SF0 - WD40 REPEAT PROTEIN // NOTCHLESS PROTEIN HOMOLOG 1; Predicted WD-4 repeat family protein / notchless protein, putative 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGCTGTAGAGGATGGGAGAAATTGGCGGGATGGCTAACGAGAGGCGG
Internal bar code:ATTCGGCGATATGCTAAAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1088
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAACCCGTTCATTTGCTT
Suggested primer 2:CCTCCGTCCGTCTTACATGG