Insertion junction: CLIP2.065283_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065283
Chromosome:chromosome 16
Location:1623651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g654150 FAP63 Flagellar Associated Protein 63 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAATTCATTAGGCAATTCAGCTCTGCCCCAAAAACACAAGGGCCTTTTA
Internal bar code:AATTGGGCGGATAGAAATTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCCAAGAACGGTATCAA
Suggested primer 2:CCTGCCCCGATTTTGAGAGT