Insertion junction: CLIP2.065289_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065289
Chromosome:chromosome 2
Location:4513282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106750 uS9m,MRPS9 (1 of 2) PTHR21569//PTHR21569:SF1 - RIBOSOMAL PROTEIN S9 // 28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL; Mitochondrial ribosomal protein S9 3'UTR
Cre02.g106800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTACCGGTAAACAGCCATCAGCATCTTGGCCGTAGACACGGCGCGCTC
Internal bar code:GAGGGAAGACCATCTTGAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1519
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGCTGTTGCAGGAGGG
Suggested primer 2:TTAGGCACGTAGGTTGGCAG