Insertion junction: CLIP2.065290_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065290
Chromosome:chromosome 3
Location:4738287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177550 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGGCTCCGCCCGGCGCGGCGTGTTTCGGTGGTTGCGGCCAAGGAGGA
Internal bar code:ACGCGGAATTGTCGAACTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1043
LEAP-Seq percent confirming:47.2222
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTACAACAGGGCAAGCCTGA
Suggested primer 2:GTGTGGATGTGCTGGGATCA