Insertion junction: CLIP2.065290_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065290
Chromosome:chromosome 3
Location:4738292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177550 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGGCTCACTTGCACTCCCGCCATCCTTCACAACGCTCAGGCGCCCAG
Internal bar code:ACGCGGAATTGTCGAACTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1099
LEAP-Seq percent confirming:41.1765
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGATGTGCTGGGATCA
Suggested primer 2:CTACAACAGGGCAAGCCTGA