Insertion junction: CLIP2.065291_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065291
Chromosome:chromosome 7
Location:5906919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g354050 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGTGTGCCTAGTGATGGGGTCCACCCGCCCCACTGCTGTGCACCGCCG
Internal bar code:AAGGTGGTTGGCGGTTACCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3079
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCACATGATACCGCG
Suggested primer 2:AGTGTGGTGCTGTGTGACAA