Insertion junction: CLIP2.065292_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065292
Chromosome:chromosome 12
Location:3113031
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500900 PIAS1,SIZ1 (1 of 1) K04706 - E3 SUMO-protein ligase PIAS1 (PIAS1); SUMO ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGGAATGCGTGGGACCGTGCACACACGGAAGTCATACCGTAGGTGTG
Internal bar code:AGATGTAGGGGACTAGCTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1928
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGTGCAACACCTTCAAG
Suggested primer 2:TTATCGGGGCTGCATCCATC