Insertion junction: CLIP2.065293_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065293
Chromosome:chromosome 1
Location:6118342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043500 (1 of 1) PTHR20882//PTHR20882:SF14 - FAMILY NOT NAMED // CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTTGGCACGCTCGCCTACACGCCCTTGCCGAAGTTGTTGAGACAGTT
Internal bar code:ACGATGCTATGGAATAAGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2425
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTCAATGCAGGCCAAC
Suggested primer 2:AAGAGCTGACTGGGCTGAAC