Insertion junction: CLIP2.065298_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065298
Chromosome:chromosome 10
Location:4798058
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453000 (1 of 2) PF11371 - Protein of unknown function (DUF3172) (DUF3172) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGATCTCCTCAACACCCGCCGGGTGGCCCCTTCAACCGCCCCACACC
Internal bar code:GGGTGTTACGGCCGAGCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCCATGAACACCTTTGC
Suggested primer 2:CTCCAGGGAGTCAGGGATCA