Insertion junction: CLIP2.065299_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065299
Chromosome:chromosome 3
Location:5378846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183500 (1 of 1) K14851 - ribosomal RNA-processing protein 17 (RRP17, NOL12) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGACGACAGCGCAACGTTGTGATATGGCCGTATGGCATGGGGTGCGCA
Internal bar code:TCCATGTTCTTGAGATTAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2137
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGTTCTCCCTTCCGAAA
Suggested primer 2:AAGAAGGGGAAGCGGTGATG