Insertion junction: CLIP2.065304_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065304
Chromosome:chromosome 12
Location:7238673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558950 (1 of 1) IPR000104//IPR009071 - Antifreeze protein, type I // High mobility group box domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGCCATCGCAACGACGGGGTCTGCTGCCAGTCACAGCCATCGTCTGG
Internal bar code:GCGAAGGCATGCAAGAAGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3877
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTCCTGCTTTCCCAGAT
Suggested primer 2:ACGAATGGGGAGCTGAAGTG