Insertion junction: CLIP2.065319_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065319
Chromosome:chromosome 17
Location:862247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702250 TRP4 Transient receptor potential ion channel protein; (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN 3'UTR
Cre17.g702300 (1 of 2) PF04930 - FUN14 family (FUN14) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGCACAACTCACAGTTCCAGCCATCCCCGAATGGCATCAACCTCCG
Internal bar code:GGGCGGGCAGCCTCGGAGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:245
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGACCTGAGACACGCAAC
Suggested primer 2:GGTTAGAGGGGACTTGGTGC