Insertion junction: CLIP2.065323_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065323
Chromosome:chromosome 3
Location:6854908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g197600 (1 of 1) PTHR12972//PTHR12972:SF0 - DOWNSTREAM NEIGHBOR OF SON // PROTEIN DOWNSTREAM NEIGHBOR OF SON 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGGCATCAGCACGGCGGAATAGCAACTGAGTGAACTTGCGCGTGGCA
Internal bar code:TCGGATATCCCTAGGACTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:4574
LEAP-Seq percent confirming:59.2857
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGTGCGCGACATTGAAG
Suggested primer 2:GCTGACCGTGTTGTCAAACC