Insertion junction: CLIP2.065328_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065328
Chromosome:plastome
Location:58703
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802286 ycf12 proposed transmembrane component of photosystem II; (1 of 1) PF05969 - Photosystem II complex subunit Ycf12 (PSII_Ycf12) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTAAGAGCTAATTCAATATTCATATGAAAAATTTTTTTTTATATACA
Internal bar code:CCCGCAAGTTTTTGTCGCCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCAGAGCGTCCTTTCTG
Suggested primer 2:GTTCGTAGCCAGACCACACA