Insertion junction: CLIP2.065329_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065329
Chromosome:chromosome 3
Location:2307913
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157900 (1 of 1) PTHR18937//PTHR18937:SF162 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACCCCCTCCATTCCATACAGGATCCGCGCATTCGACTCTGCGCCCC
Internal bar code:TCTGTTTTGGATGCGCGGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3200
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGCGGAATAGGATACCC
Suggested primer 2:CCGTATCCCTAGCACGTGAC