Insertion junction: CLIP2.065333_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065333
Chromosome:chromosome 1
Location:1735212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009575 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor 3'UTR
Cre01.g800033 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATTTGAGTGGAACCTGACAAGAGACAGAGCAACTCCCCGCTGACCCA
Internal bar code:ATTTGCGGGATCCGCCCATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2006
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGACCTGACCCGTCATT
Suggested primer 2:GCCACAGGAAAGGTTGCTTG