Insertion junction: CLIP2.065338_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065338
Chromosome:chromosome 7
Location:3456992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335650 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAAGTGAAGTTCCTGGGGACTCAGCCCTGTGTTTAGCAGGCCCGCGGT
Internal bar code:TCGATCGTTTGTTAGCGAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTCTGCTTGGGGTATG
Suggested primer 2:CAATCGCCGCATACAACCTG