Insertion junction: CLIP2.065349_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065349
Chromosome:chromosome 7
Location:5526780
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351550 (1 of 1) PTHR31319//PTHR31319:SF1 - FAMILY NOT NAMED // CCT MOTIF FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGGGTGAAGGGCGGCGCGGGCACAGAGATACACACGTGTCAACACCA
Internal bar code:TACTACATTGCGAGGTTGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1917
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCATGAGCGATGCACTG
Suggested primer 2:AGGCGTTTAGTGCTGACTCC