Insertion junction: CLIP2.065365_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065365
Chromosome:chromosome 11
Location:3682645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGATTGATTAGGTACTTACAATGCAGGCAGGAGCGAGGCTGCCTAA
Internal bar code:GAGGGGGAAGGTTCCTGGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1767
LEAP-Seq percent confirming:88.6364
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGCGTGCTCGTAAAGT
Suggested primer 2:CCCACACACACATCCCTACC