Insertion junction: CLIP2.065367_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065367
Chromosome:chromosome 14
Location:2523569
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624500 RRP46 Exosome complex exonuclease component; (1 of 1) K12590 - exosome complex component RRP46 (RRP46, EXOSC5) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCGCAACGCGGAAGCGGCTGGGCGTTGAGCAGGGGTCTTGTAGGCG
Internal bar code:GACGATGGGAAGGGCTATTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1984
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATGGCCAAACCTCTCAT
Suggested primer 2:CATCATGTTTAGGGCGCGTG