Insertion junction: CLIP2.065375_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065375
Chromosome:chromosome 12
Location:3114011
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500900 PIAS1,SIZ1 (1 of 1) K04706 - E3 SUMO-protein ligase PIAS1 (PIAS1); SUMO ligase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGGTACCCTAGGACAGAGACAGAGACATTAAGATAGGAGCTGGATTG
Internal bar code:GGATGGTTTCTCATTCAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2483
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAGCAAGGGGTTATCC
Suggested primer 2:CTTGAAGGTGTTGCACTGCC