Insertion junction: CLIP2.065378_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065378
Chromosome:chromosome 16
Location:4493996
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g667700 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTTGACGCCCCCAAGCACACGCCCCACCACACGCGCCCCACCACCCA
Internal bar code:ATTGCCGTTGACCCTTCATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:58.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCT
Suggested primer 2:ATGCTCGGGTTCTGGTCTTG