Insertion junction: CLIP2.065391_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065391
Chromosome:chromosome 3
Location:3800484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169850 TSC1 (1 of 1) PTHR10890:SF3 - CYSTEINE--TRNA LIGASE, CYTOPLASMIC; Cysteinyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCACATCAGTCGCATGTCGCTCGCAAGCCTCCAACCCACTTCTTTCA
Internal bar code:AGTAATACTTCAGTGATAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3595
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGGGAGGGGCTAGTAGG
Suggested primer 2:GGTTGGGACATTGGTTTGGC