Insertion junction: CLIP2.065394_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065394
Chromosome:chromosome 10
Location:5954234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g461200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTCAAACCTGGTCGGCAAGCCCCGAGACCAGGTGCAATCAGTATGAAT
Internal bar code:GCTTGTGATTAGACGGTTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3900
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AGATTGAAAGGCCTCGTGGG
Suggested primer 2:CCCCCGATATGCACTCTGTC