Insertion junction: CLIP2.065399_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065399
Chromosome:chromosome 3
Location:5156805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTACCGTATGTGCACGAACATAACCAGGTCGCCAGGTCTTGGGACCTTA
Internal bar code:GATAGACGTTGGGTATGGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1284
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATTGCACACACGTCAGT
Suggested primer 2:AGAAACGTCCGCACTGATGT