Insertion junction: CLIP2.065400_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065400
Chromosome:chromosome 12
Location:8555682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549000 PHC4 Pherophorin-chlamydomonas homolog 4; (1 of 71) PF12499 - Pherophorin (DUF3707) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGAGAAATGCGGTATCCGACTGTCTCGACCTACCGTATGCACTCTGCA
Internal bar code:CGTCTATTGTTTGATGTGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1590
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGGTAGCCAATGCAATG
Suggested primer 2:GCTGTACAAGGCGGAGTTCT