Insertion junction: CLIP2.065405_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065405
Chromosome:chromosome 13
Location:1855931
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575300 (1 of 1) K08876 - SCY1-like protein 1 (SCYL1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCACTGTCATGAAGCTGCACCATCAACCTGCGTACCGGTCTACCTCC
Internal bar code:CAAAATCATTGAGAGGAGCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3457
LEAP-Seq percent confirming:84.375
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCCACCTTTGCCGAGGAG
Suggested primer 2:CCCCTGTATGGAAACTGCGT