Insertion junction: CLIP2.065406_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065406
Chromosome:chromosome 6
Location:6108942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g291250 (1 of 3) PF03909 - BSD domain (BSD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCGTGGATCACACCGCTTCAGCAGGTTCTTGCGCGTTTGGTCATGTC
Internal bar code:AGGATGGACTGGGAAAGTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1531
LEAP-Seq percent confirming:95.3488
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCTGGTTTTGACACTTG
Suggested primer 2:CTGGAGGACCTGGACGACTA