Insertion junction: CLIP2.065411_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065411
Chromosome:chromosome 10
Location:560447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421450 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGCACGTGTTCGCCTACCGTGTTTACACACAGTGCCTGCACAGGGC
Internal bar code:GTATTTCCGTGCTGTTTAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4733
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTTTACTGGAACACCGA
Suggested primer 2:CCCGTCACAAGCTTCCATCT