Insertion junction: CLIP2.065425_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065425
Chromosome:chromosome 16
Location:830182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801884 (1 of 1) K19001 - ATP-dependent DNA helicase (HELLS, DDM1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAGGTGAGCGCGTGTGTATGCGTTCCAAGGTCGCGGATGTTGGCGGC
Internal bar code:ATTCAACAGACCAATTTCAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1607
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGAGGAGGAGAAGGAGG
Suggested primer 2:AACAATCCCCGGTCCATCAC