Insertion junction: CLIP2.065426_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065426
Chromosome:chromosome 12
Location:6063458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534945 (1 of 2) K18740 - exonuclease 3'-5' domain-containing protein 1 (EXD1, EGL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGAGTTCCCCGGCGCCCCGCCCGCGCGTGCACACCAGCGACTCTCAT
Internal bar code:AAATAGGCACACTAGAAGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTGAGACAGCTCCGACT
Suggested primer 2:TTTGGCGAAAATGCAGGGTG