Insertion junction: CLIP2.065428_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065428
Chromosome:chromosome 7
Location:4844344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346150 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCACCGCGCCTGAGCACGTCGGACCATATCTTTGTGACTACGAGGT
Internal bar code:TGTTGTCAATAATCCACTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:693
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGTGCTCGCAGCTATCG
Suggested primer 2:AATCCTCAGACAGCAGCCAC