Insertion junction: CLIP2.065434_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065434
Chromosome:chromosome 2
Location:797635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078500 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGACTCTCCGAGACGTGTTTGAGTACTAGACGTTTGACGGACTAGAC
Internal bar code:GCCTCTGCATGCCTAAACGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1493
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGTTGTGAGGAGTTCGG
Suggested primer 2:GATACCGAAACATGTGCGCC