Insertion junction: CLIP2.065440_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065440
Chromosome:chromosome 9
Location:4106097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399252 intron
Cre09.g399289 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGCACTATGCGGCAGACTCAGATACAGGCTTCGCAGCCAAGAAGTCC
Internal bar code:AATTTAGAAAGTGAGATTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4045
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGGACATTACGTGCGA
Suggested primer 2:GCGTTTCAGCATCGATCCAC