Insertion junction: CLIP2.065442_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065442
Chromosome:chromosome 10
Location:2887021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439650 COG8 (1 of 1) PF04124 - Dor1-like family (Dor1); Component of oligomeric golgi complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATGCCTTCCGGCCTTACGCCGTGCCTACTACGGTCCCCGTGTCCTCC
Internal bar code:CACTGTTGGTCCGTGACATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1083
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGTTCGGGGCTACGGGTA
Suggested primer 2:AACCTGGAGACTCGCAACAG