Insertion junction: CLIP2.065444_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065444
Chromosome:chromosome 14
Location:2127156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621700 MMP31 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGAATTATGTGTGCTTGGCGCAGGCCTGGGCCTGAAAGTGGAGGAAA
Internal bar code:AAGGGCTAGCACCGTGCAACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2663
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGAACTGAGGATGTGCT
Suggested primer 2:TCGCCCGTCATCATCATCAG